Data Refinement Workflow v17 (v1) run 31 Jul 2015 08:50:29 UTC

Taverna Server Log

Portal Log

  undefined method `id' for true:TrueClass
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/bundler/gems/taverna-player-13729ab3c207/lib/taverna_player/worker.rb:62:in `perform'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/backend/base.rb:105:in `block in invoke_job'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:60:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:60:in `block in initialize'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:65:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:65:in `execute'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:38:in `run_callbacks'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/backend/base.rb:102:in `invoke_job'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:207:in `block (2 levels) in run'
/usr/lib/ruby/1.9.1/timeout.rb:68:in `timeout'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:207:in `block in run'
/usr/lib/ruby/1.9.1/benchmark.rb:295:in `realtime'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:206:in `run'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:274:in `block in reserve_and_run_one_job'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:60:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:60:in `block in initialize'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:65:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:65:in `execute'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:38:in `run_callbacks'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:274:in `reserve_and_run_one_job'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:190:in `block in work_off'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:189:in `times'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:189:in `work_off'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:154:in `block (4 levels) in start'
/usr/lib/ruby/1.9.1/benchmark.rb:295:in `realtime'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:153:in `block (3 levels) in start'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:60:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:60:in `block in initialize'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:65:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:65:in `execute'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:38:in `run_callbacks'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:152:in `block (2 levels) in start'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:151:in `loop'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:151:in `block in start'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/plugins/clear_locks.rb:7:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/plugins/clear_locks.rb:7:in `block (2 levels) in <class:ClearLocks>'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:78:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:78:in `block (2 levels) in add'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:60:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:60:in `block in initialize'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:78:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:78:in `block in add'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:65:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:65:in `execute'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/lifecycle.rb:38:in `run_callbacks'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/worker.rb:150:in `start'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/command.rb:104:in `run'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/command.rb:92:in `block in run_process'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/daemons-1.1.9/lib/daemons/application.rb:255:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/daemons-1.1.9/lib/daemons/application.rb:255:in `block in start_proc'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/daemons-1.1.9/lib/daemons/daemonize.rb:82:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/daemons-1.1.9/lib/daemons/daemonize.rb:82:in `call_as_daemon'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/daemons-1.1.9/lib/daemons/application.rb:259:in `start_proc'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/daemons-1.1.9/lib/daemons/application.rb:296:in `start'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/daemons-1.1.9/lib/daemons/controller.rb:70:in `run'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/daemons-1.1.9/lib/daemons.rb:197:in `block in run_proc'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/daemons-1.1.9/lib/daemons/cmdline.rb:109:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/daemons-1.1.9/lib/daemons/cmdline.rb:109:in `catch_exceptions'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/daemons-1.1.9/lib/daemons.rb:196:in `run_proc'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/command.rb:90:in `run_process'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/command.rb:83:in `block in daemonize'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/command.rb:81:in `times'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/delayed_job-4.0.2/lib/delayed/command.rb:81:in `daemonize'
/opt/BioVeLPortal/lib/seek/workers.rb:20:in `block in start'
/opt/BioVeLPortal/lib/seek/workers.rb:20:in `map'
/opt/BioVeLPortal/lib/seek/workers.rb:20:in `start'
/opt/BioVeLPortal/lib/tasks/seek_workers.rake:11:in `block (3 levels) in <top (required)>'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/task.rb:240:in `call'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/task.rb:240:in `block in execute'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/task.rb:235:in `each'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/task.rb:235:in `execute'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/task.rb:179:in `block in invoke_with_call_chain'
/usr/lib/ruby/1.9.1/monitor.rb:211:in `mon_synchronize'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/task.rb:172:in `invoke_with_call_chain'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/task.rb:165:in `invoke'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/application.rb:150:in `invoke_task'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/application.rb:106:in `block (2 levels) in top_level'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/application.rb:106:in `each'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/application.rb:106:in `block in top_level'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/application.rb:115:in `run_with_threads'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/application.rb:100:in `top_level'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/application.rb:78:in `block in run'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/application.rb:176:in `standard_exception_handling'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/lib/rake/application.rb:75:in `run'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/gems/rake-10.3.2/bin/rake:33:in `<top (required)>'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/bin/rake:19:in `load'
/opt/BioVeLPortal/vendor/bundle/ruby/1.9.1/bin/rake:19:in `<main>'